Gene description for PDCD6IP |
| Gene name |
programmed cell death 6 interacting protein |
| Gene symbol |
PDCD6IP |
| Other names/aliases |
AIP1 ALIX DRIP4 HP95 MCPH29 |
| Species |
Homo sapiens |
Experiment description of studies that identified PDCD6IP in Embryonic kidney cells |
| 1
|
| Experiment ID | 787 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
29953723
|
| Organism | Homo sapiens |
| Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
| Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
| Journal name |
FEBS J
|
| Publication year | 2018 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 2
|
| Experiment ID | 788 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
29953723
|
| Organism | Homo sapiens |
| Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
| Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
| Journal name |
FEBS J
|
| Publication year | 2018 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - Fraction 4 |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation Density gradient centrifugation |
| Flotation density | 1.07-1.13 g/mL |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 3
|
| Experiment ID | 789 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
29953723
|
| Organism | Homo sapiens |
| Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
| Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
| Journal name |
FEBS J
|
| Publication year | 2018 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - Fraction 5 |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation Density gradient centrifugation |
| Flotation density | 1.07-1.13 g/mL |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 4
|
| Experiment ID | 790 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
29953723
|
| Organism | Homo sapiens |
| Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
| Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
| Journal name |
FEBS J
|
| Publication year | 2018 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - S. salar genomic DNA stimulated |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 5
|
| Experiment ID | 791 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
29953723
|
| Organism | Homo sapiens |
| Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
| Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
| Journal name |
FEBS J
|
| Publication year | 2018 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - E. coli genomic DNA stimulated |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 6
|
| Experiment ID | 792 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
29953723
|
| Organism | Homo sapiens |
| Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
| Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
| Journal name |
FEBS J
|
| Publication year | 2018 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - condition medium collected after 5 min with S. salar genomic DNA stimulation |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 7
|
| Experiment ID | 793 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
29953723
|
| Organism | Homo sapiens |
| Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
| Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
| Journal name |
FEBS J
|
| Publication year | 2018 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - condition medium collected after 45 min without S.salar genomic DNA stimulation |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 8
|
| Experiment ID | 794 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
29953723
|
| Organism | Homo sapiens |
| Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
| Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
| Journal name |
FEBS J
|
| Publication year | 2018 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - condition medium collected after 45 min with S. salar genomic DNA stimulation |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 9
|
| Experiment ID | 795 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
29953723
|
| Organism | Homo sapiens |
| Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
| Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
| Journal name |
FEBS J
|
| Publication year | 2018 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - condition medium collected after 60 min |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 10
|
| Experiment ID | 796 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
29953723
|
| Organism | Homo sapiens |
| Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
| Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
| Journal name |
FEBS J
|
| Publication year | 2018 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - on ice with S. salar genomic DNA stimulation |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 11
|
| Experiment ID | 797 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
29953723
|
| Organism | Homo sapiens |
| Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
| Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
| Journal name |
FEBS J
|
| Publication year | 2018 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - DNase I treated |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 12
|
| Experiment ID | 798 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
29953723
|
| Organism | Homo sapiens |
| Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
| Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
| Journal name |
FEBS J
|
| Publication year | 2018 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - DNase I treated with S. salar genomic DNA stimulation |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 13
|
| Experiment ID | 799 |
| Identified molecule | protein
|
| Extracellular vesicle type | Microvesicles |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
29953723
|
| Organism | Homo sapiens |
| Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
| Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
| Journal name |
FEBS J
|
| Publication year | 2018 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T |
| Isolation/purification methods | Differential centrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 14
|
| Experiment ID | 800 |
| Identified molecule | protein
|
| Extracellular vesicle type | Microvesicles |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
29953723
|
| Organism | Homo sapiens |
| Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
| Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
| Journal name |
FEBS J
|
| Publication year | 2018 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - ODN 2137PS stimulated |
| Isolation/purification methods | Differential centrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 15
|
| Experiment ID | 801 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
29953723
|
| Organism | Homo sapiens |
| Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
| Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
| Journal name |
FEBS J
|
| Publication year | 2018 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - ODN 2137PS stimulated |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 16
|
| Experiment ID | 1659 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | Small EVs |
| Identification method | Western blotting
|
| PubMed ID |
34108659
|
| Organism | Homo sapiens |
| Experiment description | Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
| Authors | Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R. |
| Journal name |
Nat Cell Biol
|
| Publication year | 2021 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein mRNA |
| Methods used in the study | RT-qPCR Western blotting Mass spectrometry Flow cytometry |
| EV-TRACK |
-
|
|
|
| 17
|
| Experiment ID | 1780 |
| Identified molecule | protein
|
| Extracellular vesicle type | Small extracellular vesicles |
| MISEV | Small EVs |
| Identification method | Western blotting
|
| PubMed ID |
35932288
|
| Organism | Homo sapiens |
| Experiment description | Specific anti-glioma targeted-delivery strategy of engineered small extracellular vesicles dual-functionalised by Angiopep-2 and TAT peptides |
| Authors | Zhu Z, Zhai Y, Hao Y, Wang Q, Han F, Zheng W, Hong J, Cui L, Jin W, Ma S, Yang L, Cheng G. |
| Journal name |
J Extracell Vesicles
|
| Publication year | 2022 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 18
|
| Experiment ID | 1781 |
| Identified molecule | protein
|
| Extracellular vesicle type | Small extracellular vesicles |
| MISEV | Small EVs |
| Identification method | Western blotting
|
| PubMed ID |
35932288
|
| Organism | Homo sapiens |
| Experiment description | Specific anti-glioma targeted-delivery strategy of engineered small extracellular vesicles dual-functionalised by Angiopep-2 and TAT peptides |
| Authors | Zhu Z, Zhai Y, Hao Y, Wang Q, Han F, Zheng W, Hong J, Cui L, Jin W, Ma S, Yang L, Cheng G. |
| Journal name |
J Extracell Vesicles
|
| Publication year | 2022 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 19
|
| Experiment ID | 1782 |
| Identified molecule | protein
|
| Extracellular vesicle type | Small extracellular vesicles |
| MISEV | Small EVs |
| Identification method | Western blotting
|
| PubMed ID |
35932288
|
| Organism | Homo sapiens |
| Experiment description | Specific anti-glioma targeted-delivery strategy of engineered small extracellular vesicles dual-functionalised by Angiopep-2 and TAT peptides |
| Authors | Zhu Z, Zhai Y, Hao Y, Wang Q, Han F, Zheng W, Hong J, Cui L, Jin W, Ma S, Yang L, Cheng G. |
| Journal name |
J Extracell Vesicles
|
| Publication year | 2022 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 20
|
| Experiment ID | 1783 |
| Identified molecule | protein
|
| Extracellular vesicle type | Small extracellular vesicles |
| MISEV | Small EVs |
| Identification method | Western blotting
|
| PubMed ID |
35932288
|
| Organism | Homo sapiens |
| Experiment description | Specific anti-glioma targeted-delivery strategy of engineered small extracellular vesicles dual-functionalised by Angiopep-2 and TAT peptides |
| Authors | Zhu Z, Zhai Y, Hao Y, Wang Q, Han F, Zheng W, Hong J, Cui L, Jin W, Ma S, Yang L, Cheng G. |
| Journal name |
J Extracell Vesicles
|
| Publication year | 2022 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 21
|
| Experiment ID | 1925 |
| Identified molecule | protein
|
| Extracellular vesicle type | Small extracellular vesicles |
| MISEV | Small EVs |
| Identification method | Western blotting
|
| PubMed ID |
36214496
|
| Organism | Homo sapiens |
| Experiment description | Contaminating transfection complexes can masquerade as small extracellular vesicles and impair their delivery of RNA |
| Authors | McCann J, Sosa-Miranda CD, Guo H, Reshke R, Savard A, Zardini Buzatto A, Taylor JA, Li L, Gibbings DJ. |
| Journal name |
J Extracell Vesicles
|
| Publication year | 2022 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293 |
| Isolation/purification methods | Differential centrifugation Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 22
|
| Experiment ID | 1926 |
| Identified molecule | protein
|
| Extracellular vesicle type | Small extracellular vesicles |
| MISEV | Small EVs |
| Identification method | Western blotting
|
| PubMed ID |
36214496
|
| Organism | Homo sapiens |
| Experiment description | Contaminating transfection complexes can masquerade as small extracellular vesicles and impair their delivery of RNA |
| Authors | McCann J, Sosa-Miranda CD, Guo H, Reshke R, Savard A, Zardini Buzatto A, Taylor JA, Li L, Gibbings DJ. |
| Journal name |
J Extracell Vesicles
|
| Publication year | 2022 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293 |
| Isolation/purification methods | Differential centrifugation Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 23
|
| Experiment ID | 1932 |
| Identified molecule | protein
|
| Extracellular vesicle type | Small extracellular vesicles |
| MISEV | Small EVs |
| Identification method | Western blotting
|
| PubMed ID |
36214496
|
| Organism | Homo sapiens |
| Experiment description | Contaminating transfection complexes can masquerade as small extracellular vesicles and impair their delivery of RNA |
| Authors | McCann J, Sosa-Miranda CD, Guo H, Reshke R, Savard A, Zardini Buzatto A, Taylor JA, Li L, Gibbings DJ. |
| Journal name |
J Extracell Vesicles
|
| Publication year | 2022 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293 - fraction 3-4 |
| Isolation/purification methods | Differential centrifugation Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 24
|
| Experiment ID | 2010 |
| Identified molecule | protein
|
| Extracellular vesicle type | Extracellular vesicles |
| MISEV | Small EVs |
| Identification method | Western blotting
|
| PubMed ID |
36417867
|
| Organism | Homo sapiens |
| Experiment description | Extracellular vesicles carrying HIV-1 Nef induce long-term hyperreactivity of myeloid cells |
| Authors | Dubrovsky L, Brichacek B, Prashant NM, Pushkarsky T, Mukhamedova N, Fleetwood AJ, Xu Y, Dragoljevic D, Fitzgerald M, Horvath A, Murphy AJ, Sviridov D, Bukrinsky MI. |
| Journal name |
Cell Rep
|
| Publication year | 2022 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T |
| Isolation/purification methods | Differential centrifugation Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 25
|
| Experiment ID | 2011 |
| Identified molecule | protein
|
| Extracellular vesicle type | Extracellular vesicles |
| MISEV | Small EVs |
| Identification method | Western blotting
|
| PubMed ID |
36417867
|
| Organism | Homo sapiens |
| Experiment description | Extracellular vesicles carrying HIV-1 Nef induce long-term hyperreactivity of myeloid cells |
| Authors | Dubrovsky L, Brichacek B, Prashant NM, Pushkarsky T, Mukhamedova N, Fleetwood AJ, Xu Y, Dragoljevic D, Fitzgerald M, Horvath A, Murphy AJ, Sviridov D, Bukrinsky MI. |
| Journal name |
Cell Rep
|
| Publication year | 2022 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T |
| Isolation/purification methods | Differential centrifugation Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 26
|
| Experiment ID | 3250 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
34545097
|
| Organism | Homo sapiens |
| Experiment description | Exosome-mediated stable epigenetic repression of HIV-1 |
| Authors | Shrivastava S, Ray RM, Holguin L, Echavarria L, Grepo N, Scott TA, Burnett J, Morris KV. |
| Journal name |
Nat Commun
|
| Publication year | 2021 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T |
| Isolation/purification methods | Differential centrifugation Ultracentrifugation Filtration |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting |
| EV-TRACK |
-
|
|
|
| 27
|
| Experiment ID | 3251 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
34545097
|
| Organism | Homo sapiens |
| Experiment description | Exosome-mediated stable epigenetic repression of HIV-1 |
| Authors | Shrivastava S, Ray RM, Holguin L, Echavarria L, Grepo N, Scott TA, Burnett J, Morris KV. |
| Journal name |
Nat Commun
|
| Publication year | 2021 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T |
| Isolation/purification methods | Differential centrifugation Ultracentrifugation Filtration |
| Flotation density | - |
| Molecules identified in the study | Protein mRNA |
| Methods used in the study | Western blotting RT-qPCR |
| EV-TRACK |
-
|
|
|
| 28
|
| Experiment ID | 3252 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | EVs |
| Identification method | Western blotting
|
| PubMed ID |
34545097
|
| Organism | Homo sapiens |
| Experiment description | Exosome-mediated stable epigenetic repression of HIV-1 |
| Authors | Shrivastava S, Ray RM, Holguin L, Echavarria L, Grepo N, Scott TA, Burnett J, Morris KV. |
| Journal name |
Nat Commun
|
| Publication year | 2021 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T |
| Isolation/purification methods | Differential centrifugation Ultracentrifugation Filtration |
| Flotation density | - |
| Molecules identified in the study | Protein mRNA |
| Methods used in the study | Western blotting RT-qPCR |
| EV-TRACK |
-
|
|
|
| 29
|
| Experiment ID | 1408 |
| Identified molecule | Protein
|
| Extracellular vesicle type | Extracellular vesicles |
| MISEV | Small EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
36706192
|
| Organism | Homo sapiens |
| Experiment description | Displaying and delivering viral membrane antigens via WW domain-activated extracellular vesicles |
| Authors | Choi S, Yang Z, Wang Q, Qiao Z, Sun M, Wiggins J, Xiang SH, Lu Q. |
| Journal name |
Sci Adv
|
| Publication year | 2023 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting Mass spectrometry |
| EV-TRACK |
-
|
|
|
| 30
|
| Experiment ID | 1413 |
| Identified molecule | Protein
|
| Extracellular vesicle type | Extracellular vesicles |
| MISEV | Small EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
36706192
|
| Organism | Homo sapiens |
| Experiment description | Displaying and delivering viral membrane antigens via WW domain-activated extracellular vesicles |
| Authors | Choi S, Yang Z, Wang Q, Qiao Z, Sun M, Wiggins J, Xiang SH, Lu Q. |
| Journal name |
Sci Adv
|
| Publication year | 2023 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - Fraction 5 |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation OptiPrep density gradient centrifugation |
| Flotation density | 1.151 g/mL |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting Mass spectrometry |
| EV-TRACK |
-
|
|
|
| 31
|
| Experiment ID | 1659 |
| Identified molecule | Protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | Small EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
34108659
|
| Organism | Homo sapiens |
| Experiment description | Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
| Authors | Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R. |
| Journal name |
Nat Cell Biol
|
| Publication year | 2021 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein mRNA |
| Methods used in the study | RT-qPCR Western blotting Mass spectrometry Flow cytometry |
| EV-TRACK |
-
|
|
|
| 32
|
| Experiment ID | 1671 |
| Identified molecule | Protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | Small EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
34108659
|
| Organism | Homo sapiens |
| Experiment description | Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
| Authors | Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R. |
| Journal name |
Nat Cell Biol
|
| Publication year | 2021 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - Exo-rich fractions 7-10 pooled |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation Size exclusion chromatography |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting Mass spectrometry |
| EV-TRACK |
-
|
|
|
| 33
|
| Experiment ID | 1671 |
| Identified molecule | Protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | Small EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
34108659
|
| Organism | Homo sapiens |
| Experiment description | Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
| Authors | Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R. |
| Journal name |
Nat Cell Biol
|
| Publication year | 2021 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - Exo-rich fractions 7-10 pooled |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation Size exclusion chromatography |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Western blotting Mass spectrometry |
| EV-TRACK |
-
|
|
|
| 34
|
| Experiment ID | 1672 |
| Identified molecule | Protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | Small EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
34108659
|
| Organism | Homo sapiens |
| Experiment description | Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
| Authors | Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R. |
| Journal name |
Nat Cell Biol
|
| Publication year | 2021 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - Exo-rich fractions 1-6 pooled |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation OptiPrep density gradient centrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Mass spectrometry |
| EV-TRACK |
-
|
|
|
| 35
|
| Experiment ID | 1672 |
| Identified molecule | Protein
|
| Extracellular vesicle type | Exosomes |
| MISEV | Small EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
34108659
|
| Organism | Homo sapiens |
| Experiment description | Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
| Authors | Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R. |
| Journal name |
Nat Cell Biol
|
| Publication year | 2021 |
| Sample | Embryonic kidney cells |
| Sample name | HEK293T - Exo-rich fractions 1-6 pooled |
| Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation OptiPrep density gradient centrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Mass spectrometry |
| EV-TRACK |
-
|
|
|