Gene description for PDCD6IP |
Gene name |
programmed cell death 6 interacting protein |
Gene symbol |
PDCD6IP |
Other names/aliases |
AIP1 ALIX DRIP4 HP95 MCPH29 |
Species |
Homo sapiens |
Experiment description of studies that identified PDCD6IP in Embryonic kidney cells |
1
|
Experiment ID | 787 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
29953723
|
Organism | Homo sapiens |
Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
Journal name |
FEBS J
|
Publication year | 2018 |
Sample | Embryonic kidney cells |
Sample name | HEK293T |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
2
|
Experiment ID | 788 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
29953723
|
Organism | Homo sapiens |
Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
Journal name |
FEBS J
|
Publication year | 2018 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - Fraction 4 |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation Density gradient centrifugation |
Flotation density | 1.07-1.13 g/mL |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
3
|
Experiment ID | 789 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
29953723
|
Organism | Homo sapiens |
Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
Journal name |
FEBS J
|
Publication year | 2018 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - Fraction 5 |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation Density gradient centrifugation |
Flotation density | 1.07-1.13 g/mL |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
4
|
Experiment ID | 790 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
29953723
|
Organism | Homo sapiens |
Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
Journal name |
FEBS J
|
Publication year | 2018 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - S. salar genomic DNA stimulated |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
5
|
Experiment ID | 791 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
29953723
|
Organism | Homo sapiens |
Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
Journal name |
FEBS J
|
Publication year | 2018 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - E. coli genomic DNA stimulated |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
6
|
Experiment ID | 792 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
29953723
|
Organism | Homo sapiens |
Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
Journal name |
FEBS J
|
Publication year | 2018 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - condition medium collected after 5 min with S. salar genomic DNA stimulation |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
7
|
Experiment ID | 793 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
29953723
|
Organism | Homo sapiens |
Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
Journal name |
FEBS J
|
Publication year | 2018 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - condition medium collected after 45 min without S.salar genomic DNA stimulation |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
8
|
Experiment ID | 794 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
29953723
|
Organism | Homo sapiens |
Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
Journal name |
FEBS J
|
Publication year | 2018 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - condition medium collected after 45 min with S. salar genomic DNA stimulation |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
9
|
Experiment ID | 795 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
29953723
|
Organism | Homo sapiens |
Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
Journal name |
FEBS J
|
Publication year | 2018 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - condition medium collected after 60 min |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
10
|
Experiment ID | 796 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
29953723
|
Organism | Homo sapiens |
Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
Journal name |
FEBS J
|
Publication year | 2018 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - on ice with S. salar genomic DNA stimulation |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
11
|
Experiment ID | 797 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
29953723
|
Organism | Homo sapiens |
Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
Journal name |
FEBS J
|
Publication year | 2018 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - DNase I treated |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
12
|
Experiment ID | 798 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
29953723
|
Organism | Homo sapiens |
Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
Journal name |
FEBS J
|
Publication year | 2018 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - DNase I treated with S. salar genomic DNA stimulation |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
13
|
Experiment ID | 799 |
Identified molecule | protein
|
Extracellular vesicle type | Microvesicles |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
29953723
|
Organism | Homo sapiens |
Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
Journal name |
FEBS J
|
Publication year | 2018 |
Sample | Embryonic kidney cells |
Sample name | HEK293T |
Isolation/purification methods | Differential centrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
14
|
Experiment ID | 800 |
Identified molecule | protein
|
Extracellular vesicle type | Microvesicles |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
29953723
|
Organism | Homo sapiens |
Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
Journal name |
FEBS J
|
Publication year | 2018 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - ODN 2137PS stimulated |
Isolation/purification methods | Differential centrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
15
|
Experiment ID | 801 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
29953723
|
Organism | Homo sapiens |
Experiment description | Stimulation of exosome release by extracellular DNA is conserved across multiple cell types |
Authors | Iliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R. |
Journal name |
FEBS J
|
Publication year | 2018 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - ODN 2137PS stimulated |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
16
|
Experiment ID | 1659 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | Small EVs |
Identification method | Western blotting
|
PubMed ID |
34108659
|
Organism | Homo sapiens |
Experiment description | Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
Authors | Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R. |
Journal name |
Nat Cell Biol
|
Publication year | 2021 |
Sample | Embryonic kidney cells |
Sample name | HEK293T |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein mRNA |
Methods used in the study | RT-qPCR Western blotting Mass spectrometry Flow cytometry |
EV-TRACK |
-
|
|
|
17
|
Experiment ID | 1780 |
Identified molecule | protein
|
Extracellular vesicle type | Small extracellular vesicles |
MISEV | Small EVs |
Identification method | Western blotting
|
PubMed ID |
35932288
|
Organism | Homo sapiens |
Experiment description | Specific anti-glioma targeted-delivery strategy of engineered small extracellular vesicles dual-functionalised by Angiopep-2 and TAT peptides |
Authors | Zhu Z, Zhai Y, Hao Y, Wang Q, Han F, Zheng W, Hong J, Cui L, Jin W, Ma S, Yang L, Cheng G. |
Journal name |
J Extracell Vesicles
|
Publication year | 2022 |
Sample | Embryonic kidney cells |
Sample name | HEK293T |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
18
|
Experiment ID | 1781 |
Identified molecule | protein
|
Extracellular vesicle type | Small extracellular vesicles |
MISEV | Small EVs |
Identification method | Western blotting
|
PubMed ID |
35932288
|
Organism | Homo sapiens |
Experiment description | Specific anti-glioma targeted-delivery strategy of engineered small extracellular vesicles dual-functionalised by Angiopep-2 and TAT peptides |
Authors | Zhu Z, Zhai Y, Hao Y, Wang Q, Han F, Zheng W, Hong J, Cui L, Jin W, Ma S, Yang L, Cheng G. |
Journal name |
J Extracell Vesicles
|
Publication year | 2022 |
Sample | Embryonic kidney cells |
Sample name | HEK293T |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
19
|
Experiment ID | 1782 |
Identified molecule | protein
|
Extracellular vesicle type | Small extracellular vesicles |
MISEV | Small EVs |
Identification method | Western blotting
|
PubMed ID |
35932288
|
Organism | Homo sapiens |
Experiment description | Specific anti-glioma targeted-delivery strategy of engineered small extracellular vesicles dual-functionalised by Angiopep-2 and TAT peptides |
Authors | Zhu Z, Zhai Y, Hao Y, Wang Q, Han F, Zheng W, Hong J, Cui L, Jin W, Ma S, Yang L, Cheng G. |
Journal name |
J Extracell Vesicles
|
Publication year | 2022 |
Sample | Embryonic kidney cells |
Sample name | HEK293T |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
20
|
Experiment ID | 1783 |
Identified molecule | protein
|
Extracellular vesicle type | Small extracellular vesicles |
MISEV | Small EVs |
Identification method | Western blotting
|
PubMed ID |
35932288
|
Organism | Homo sapiens |
Experiment description | Specific anti-glioma targeted-delivery strategy of engineered small extracellular vesicles dual-functionalised by Angiopep-2 and TAT peptides |
Authors | Zhu Z, Zhai Y, Hao Y, Wang Q, Han F, Zheng W, Hong J, Cui L, Jin W, Ma S, Yang L, Cheng G. |
Journal name |
J Extracell Vesicles
|
Publication year | 2022 |
Sample | Embryonic kidney cells |
Sample name | HEK293T |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
21
|
Experiment ID | 1925 |
Identified molecule | protein
|
Extracellular vesicle type | Small extracellular vesicles |
MISEV | Small EVs |
Identification method | Western blotting
|
PubMed ID |
36214496
|
Organism | Homo sapiens |
Experiment description | Contaminating transfection complexes can masquerade as small extracellular vesicles and impair their delivery of RNA |
Authors | McCann J, Sosa-Miranda CD, Guo H, Reshke R, Savard A, Zardini Buzatto A, Taylor JA, Li L, Gibbings DJ. |
Journal name |
J Extracell Vesicles
|
Publication year | 2022 |
Sample | Embryonic kidney cells |
Sample name | HEK293 |
Isolation/purification methods | Differential centrifugation Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
22
|
Experiment ID | 1926 |
Identified molecule | protein
|
Extracellular vesicle type | Small extracellular vesicles |
MISEV | Small EVs |
Identification method | Western blotting
|
PubMed ID |
36214496
|
Organism | Homo sapiens |
Experiment description | Contaminating transfection complexes can masquerade as small extracellular vesicles and impair their delivery of RNA |
Authors | McCann J, Sosa-Miranda CD, Guo H, Reshke R, Savard A, Zardini Buzatto A, Taylor JA, Li L, Gibbings DJ. |
Journal name |
J Extracell Vesicles
|
Publication year | 2022 |
Sample | Embryonic kidney cells |
Sample name | HEK293 |
Isolation/purification methods | Differential centrifugation Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
23
|
Experiment ID | 1932 |
Identified molecule | protein
|
Extracellular vesicle type | Small extracellular vesicles |
MISEV | Small EVs |
Identification method | Western blotting
|
PubMed ID |
36214496
|
Organism | Homo sapiens |
Experiment description | Contaminating transfection complexes can masquerade as small extracellular vesicles and impair their delivery of RNA |
Authors | McCann J, Sosa-Miranda CD, Guo H, Reshke R, Savard A, Zardini Buzatto A, Taylor JA, Li L, Gibbings DJ. |
Journal name |
J Extracell Vesicles
|
Publication year | 2022 |
Sample | Embryonic kidney cells |
Sample name | HEK293 - fraction 3-4 |
Isolation/purification methods | Differential centrifugation Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
24
|
Experiment ID | 2010 |
Identified molecule | protein
|
Extracellular vesicle type | Extracellular vesicles |
MISEV | Small EVs |
Identification method | Western blotting
|
PubMed ID |
36417867
|
Organism | Homo sapiens |
Experiment description | Extracellular vesicles carrying HIV-1 Nef induce long-term hyperreactivity of myeloid cells |
Authors | Dubrovsky L, Brichacek B, Prashant NM, Pushkarsky T, Mukhamedova N, Fleetwood AJ, Xu Y, Dragoljevic D, Fitzgerald M, Horvath A, Murphy AJ, Sviridov D, Bukrinsky MI. |
Journal name |
Cell Rep
|
Publication year | 2022 |
Sample | Embryonic kidney cells |
Sample name | HEK293T |
Isolation/purification methods | Differential centrifugation Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
25
|
Experiment ID | 2011 |
Identified molecule | protein
|
Extracellular vesicle type | Extracellular vesicles |
MISEV | Small EVs |
Identification method | Western blotting
|
PubMed ID |
36417867
|
Organism | Homo sapiens |
Experiment description | Extracellular vesicles carrying HIV-1 Nef induce long-term hyperreactivity of myeloid cells |
Authors | Dubrovsky L, Brichacek B, Prashant NM, Pushkarsky T, Mukhamedova N, Fleetwood AJ, Xu Y, Dragoljevic D, Fitzgerald M, Horvath A, Murphy AJ, Sviridov D, Bukrinsky MI. |
Journal name |
Cell Rep
|
Publication year | 2022 |
Sample | Embryonic kidney cells |
Sample name | HEK293T |
Isolation/purification methods | Differential centrifugation Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
26
|
Experiment ID | 3250 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
34545097
|
Organism | Homo sapiens |
Experiment description | Exosome-mediated stable epigenetic repression of HIV-1 |
Authors | Shrivastava S, Ray RM, Holguin L, Echavarria L, Grepo N, Scott TA, Burnett J, Morris KV. |
Journal name |
Nat Commun
|
Publication year | 2021 |
Sample | Embryonic kidney cells |
Sample name | HEK293T |
Isolation/purification methods | Differential centrifugation Ultracentrifugation Filtration |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting |
EV-TRACK |
-
|
|
|
27
|
Experiment ID | 3251 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
34545097
|
Organism | Homo sapiens |
Experiment description | Exosome-mediated stable epigenetic repression of HIV-1 |
Authors | Shrivastava S, Ray RM, Holguin L, Echavarria L, Grepo N, Scott TA, Burnett J, Morris KV. |
Journal name |
Nat Commun
|
Publication year | 2021 |
Sample | Embryonic kidney cells |
Sample name | HEK293T |
Isolation/purification methods | Differential centrifugation Ultracentrifugation Filtration |
Flotation density | - |
Molecules identified in the study | Protein mRNA |
Methods used in the study | Western blotting RT-qPCR |
EV-TRACK |
-
|
|
|
28
|
Experiment ID | 3252 |
Identified molecule | protein
|
Extracellular vesicle type | Exosomes |
MISEV | EVs |
Identification method | Western blotting
|
PubMed ID |
34545097
|
Organism | Homo sapiens |
Experiment description | Exosome-mediated stable epigenetic repression of HIV-1 |
Authors | Shrivastava S, Ray RM, Holguin L, Echavarria L, Grepo N, Scott TA, Burnett J, Morris KV. |
Journal name |
Nat Commun
|
Publication year | 2021 |
Sample | Embryonic kidney cells |
Sample name | HEK293T |
Isolation/purification methods | Differential centrifugation Ultracentrifugation Filtration |
Flotation density | - |
Molecules identified in the study | Protein mRNA |
Methods used in the study | Western blotting RT-qPCR |
EV-TRACK |
-
|
|
|
29
|
Experiment ID | 1408 |
Identified molecule | Protein
|
Extracellular vesicle type | Extracellular vesicles |
MISEV | Small EVs |
Identification method | Mass spectrometry
|
PubMed ID |
36706192
|
Organism | Homo sapiens |
Experiment description | Displaying and delivering viral membrane antigens via WW domain-activated extracellular vesicles |
Authors | Choi S, Yang Z, Wang Q, Qiao Z, Sun M, Wiggins J, Xiang SH, Lu Q. |
Journal name |
Sci Adv
|
Publication year | 2023 |
Sample | Embryonic kidney cells |
Sample name | HEK293T |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting Mass spectrometry |
EV-TRACK |
-
|
|
|
30
|
Experiment ID | 1413 |
Identified molecule | Protein
|
Extracellular vesicle type | Extracellular vesicles |
MISEV | Small EVs |
Identification method | Mass spectrometry
|
PubMed ID |
36706192
|
Organism | Homo sapiens |
Experiment description | Displaying and delivering viral membrane antigens via WW domain-activated extracellular vesicles |
Authors | Choi S, Yang Z, Wang Q, Qiao Z, Sun M, Wiggins J, Xiang SH, Lu Q. |
Journal name |
Sci Adv
|
Publication year | 2023 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - Fraction 5 |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation OptiPrep density gradient centrifugation |
Flotation density | 1.151 g/mL |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting Mass spectrometry |
EV-TRACK |
-
|
|
|
31
|
Experiment ID | 1659 |
Identified molecule | Protein
|
Extracellular vesicle type | Exosomes |
MISEV | Small EVs |
Identification method | Mass spectrometry
|
PubMed ID |
34108659
|
Organism | Homo sapiens |
Experiment description | Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
Authors | Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R. |
Journal name |
Nat Cell Biol
|
Publication year | 2021 |
Sample | Embryonic kidney cells |
Sample name | HEK293T |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation |
Flotation density | - |
Molecules identified in the study | Protein mRNA |
Methods used in the study | RT-qPCR Western blotting Mass spectrometry Flow cytometry |
EV-TRACK |
-
|
|
|
32
|
Experiment ID | 1671 |
Identified molecule | Protein
|
Extracellular vesicle type | Exosomes |
MISEV | Small EVs |
Identification method | Mass spectrometry
|
PubMed ID |
34108659
|
Organism | Homo sapiens |
Experiment description | Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
Authors | Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R. |
Journal name |
Nat Cell Biol
|
Publication year | 2021 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - Exo-rich fractions 7-10 pooled |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation Size exclusion chromatography |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting Mass spectrometry |
EV-TRACK |
-
|
|
|
33
|
Experiment ID | 1671 |
Identified molecule | Protein
|
Extracellular vesicle type | Exosomes |
MISEV | Small EVs |
Identification method | Mass spectrometry
|
PubMed ID |
34108659
|
Organism | Homo sapiens |
Experiment description | Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
Authors | Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R. |
Journal name |
Nat Cell Biol
|
Publication year | 2021 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - Exo-rich fractions 7-10 pooled |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation Size exclusion chromatography |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Western blotting Mass spectrometry |
EV-TRACK |
-
|
|
|
34
|
Experiment ID | 1672 |
Identified molecule | Protein
|
Extracellular vesicle type | Exosomes |
MISEV | Small EVs |
Identification method | Mass spectrometry
|
PubMed ID |
34108659
|
Organism | Homo sapiens |
Experiment description | Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
Authors | Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R. |
Journal name |
Nat Cell Biol
|
Publication year | 2021 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - Exo-rich fractions 1-6 pooled |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation OptiPrep density gradient centrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Mass spectrometry |
EV-TRACK |
-
|
|
|
35
|
Experiment ID | 1672 |
Identified molecule | Protein
|
Extracellular vesicle type | Exosomes |
MISEV | Small EVs |
Identification method | Mass spectrometry
|
PubMed ID |
34108659
|
Organism | Homo sapiens |
Experiment description | Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
Authors | Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R. |
Journal name |
Nat Cell Biol
|
Publication year | 2021 |
Sample | Embryonic kidney cells |
Sample name | HEK293T - Exo-rich fractions 1-6 pooled |
Isolation/purification methods | Differential centrifugation Filtration Ultracentrifugation OptiPrep density gradient centrifugation |
Flotation density | - |
Molecules identified in the study | Protein |
Methods used in the study | Mass spectrometry |
EV-TRACK |
-
|
|
|