Gene description for LOC106588745
Gene name programmed cell death 6-interacting protein
Gene symbol LOC106588745
Other names/aliases pdcd6ip
Species Salmo salar
 Experiment description of studies that identified LOC106588745 in Leukocytes

1
Experiment ID766
Identified moleculeprotein
Extracellular vesicle typeExosomes
MISEVEVs
Identification method Mass spectrometry
PubMed ID 29953723   
OrganismSalmo salar
Experiment descriptionStimulation of exosome release by extracellular DNA is conserved across multiple cell types
AuthorsIliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R.
Journal name FEBS J
Publication year2018
SampleLeukocytes
Sample nameHead kidney leukocytes (HKLs) - Fish 2
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyMass spectrometry
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2
Experiment ID767
Identified moleculeprotein
Extracellular vesicle typeExosomes
MISEVEVs
Identification method Mass spectrometry
PubMed ID 29953723   
OrganismSalmo salar
Experiment descriptionStimulation of exosome release by extracellular DNA is conserved across multiple cell types
AuthorsIliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R.
Journal name FEBS J
Publication year2018
SampleLeukocytes
Sample nameHead kidney leukocytes (HKLs) - ODN 2006PS stimulated - Fish 1
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyMass spectrometry
EV-TRACK -

3
Experiment ID769
Identified moleculeprotein
Extracellular vesicle typeExosomes
MISEVEVs
Identification method Mass spectrometry
PubMed ID 29953723   
OrganismSalmo salar
Experiment descriptionStimulation of exosome release by extracellular DNA is conserved across multiple cell types
AuthorsIliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R.
Journal name FEBS J
Publication year2018
SampleLeukocytes
Sample nameHead kidney leukocytes (HKLs) - ODN 2006PS stimulated - Fish 2
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyMass spectrometry
EV-TRACK -

4
Experiment ID759
Identified moleculeprotein
Extracellular vesicle typeExosomes
MISEVEVs
Identification method Mass spectrometry
Western blotting
PubMed ID 29953723   
OrganismSalmo salar
Experiment descriptionStimulation of exosome release by extracellular DNA is conserved across multiple cell types
AuthorsIliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R.
Journal name FEBS J
Publication year2018
SampleLeukocytes
Sample nameHead kidney leukocytes (HKLs)
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyMass spectrometry
Western blotting
EV-TRACK -

5
Experiment ID760
Identified moleculeprotein
Extracellular vesicle typeExosomes
MISEVEVs
Identification method Mass spectrometry
Western blotting
PubMed ID 29953723   
OrganismSalmo salar
Experiment descriptionStimulation of exosome release by extracellular DNA is conserved across multiple cell types
AuthorsIliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R.
Journal name FEBS J
Publication year2018
SampleLeukocytes
Sample nameHead kidney leukocytes (HKLs) - ODN 2006PS stimulated
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyMass spectrometry
Western blotting
EV-TRACK -

6
Experiment ID781
Identified moleculeprotein
Extracellular vesicle typeExosomes
MISEVEVs
Identification method Mass spectrometry
Western blotting
PubMed ID 29953723   
OrganismSalmo salar
Experiment descriptionStimulation of exosome release by extracellular DNA is conserved across multiple cell types
AuthorsIliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R.
Journal name FEBS J
Publication year2018
SampleLeukocytes
Sample nameHead kidney leukocytes (HKLs) - S. salar genomic DNA stimulated
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyMass spectrometry
Western blotting
EV-TRACK -

7
Experiment ID771
Identified moleculeprotein
Extracellular vesicle typeExosomes
MISEVEVs
Identification method Western blotting
PubMed ID 29953723   
OrganismSalmo salar
Experiment descriptionStimulation of exosome release by extracellular DNA is conserved across multiple cell types
AuthorsIliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R.
Journal name FEBS J
Publication year2018
SampleLeukocytes
Sample nameHead kidney leukocytes (HKLs) - R848 treated
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyWestern blotting
EV-TRACK -

8
Experiment ID772
Identified moleculeprotein
Extracellular vesicle typeExosomes
MISEVEVs
Identification method Western blotting
PubMed ID 29953723   
OrganismSalmo salar
Experiment descriptionStimulation of exosome release by extracellular DNA is conserved across multiple cell types
AuthorsIliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R.
Journal name FEBS J
Publication year2018
SampleLeukocytes
Sample nameHead kidney leukocytes (HKLs) - poly(I:C) treated
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyWestern blotting
EV-TRACK -

9
Experiment ID777
Identified moleculeprotein
Extracellular vesicle typeExosomes
MISEVEVs
Identification method Western blotting
PubMed ID 29953723   
OrganismSalmo salar
Experiment descriptionStimulation of exosome release by extracellular DNA is conserved across multiple cell types
AuthorsIliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R.
Journal name FEBS J
Publication year2018
SampleLeukocytes
Sample nameHead kidney leukocytes (HKLs) - ODN 2137PS stimulated
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyWestern blotting
EV-TRACK -

10
Experiment ID778
Identified moleculeprotein
Extracellular vesicle typeExosomes
MISEVEVs
Identification method Western blotting
PubMed ID 29953723   
OrganismSalmo salar
Experiment descriptionStimulation of exosome release by extracellular DNA is conserved across multiple cell types
AuthorsIliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R.
Journal name FEBS J
Publication year2018
SampleLeukocytes
Sample nameHead kidney leukocytes (HKLs) - ODN 2216PO/PS stimulated
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyWestern blotting
EV-TRACK -

11
Experiment ID779
Identified moleculeprotein
Extracellular vesicle typeExosomes
MISEVEVs
Identification method Western blotting
PubMed ID 29953723   
OrganismSalmo salar
Experiment descriptionStimulation of exosome release by extracellular DNA is conserved across multiple cell types
AuthorsIliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R.
Journal name FEBS J
Publication year2018
SampleLeukocytes
Sample nameHead kidney leukocytes (HKLs) - ODN 2137PS stimulated
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyWestern blotting
EV-TRACK -

12
Experiment ID780
Identified moleculeprotein
Extracellular vesicle typeExosomes
MISEVEVs
Identification method Western blotting
PubMed ID 29953723   
OrganismSalmo salar
Experiment descriptionStimulation of exosome release by extracellular DNA is conserved across multiple cell types
AuthorsIliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R.
Journal name FEBS J
Publication year2018
SampleLeukocytes
Sample nameHead kidney leukocytes (HKLs) - ODN 2137PO stimulated
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyWestern blotting
EV-TRACK -

13
Experiment ID782
Identified moleculeprotein
Extracellular vesicle typeExosomes
MISEVEVs
Identification method Western blotting
PubMed ID 29953723   
OrganismSalmo salar
Experiment descriptionStimulation of exosome release by extracellular DNA is conserved across multiple cell types
AuthorsIliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R.
Journal name FEBS J
Publication year2018
SampleLeukocytes
Sample nameHead kidney leukocytes (HKLs) - ChQ treated with ODN 2006PS stimulation
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyWestern blotting
EV-TRACK -

14
Experiment ID783
Identified moleculeprotein
Extracellular vesicle typeExosomes
MISEVEVs
Identification method Western blotting
PubMed ID 29953723   
OrganismSalmo salar
Experiment descriptionStimulation of exosome release by extracellular DNA is conserved across multiple cell types
AuthorsIliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R.
Journal name FEBS J
Publication year2018
SampleLeukocytes
Sample namePeripheral blood leukocytes (PBLs)
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyWestern blotting
EV-TRACK -

15
Experiment ID784
Identified moleculeprotein
Extracellular vesicle typeExosomes
MISEVEVs
Identification method Western blotting
PubMed ID 29953723   
OrganismSalmo salar
Experiment descriptionStimulation of exosome release by extracellular DNA is conserved across multiple cell types
AuthorsIliev D, Strandskog G, Nepal A, Aspar A, Olsen R, Jøsen J, Wolfson D, Ahluwalia BS, Handzhiyski J, Mironova R.
Journal name FEBS J
Publication year2018
SampleLeukocytes
Sample namePeripheral blood leukocytes (PBLs) - ODN 2006PS stimulated
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyWestern blotting
EV-TRACK -

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