Gene description for sucB |
| Gene name |
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase |
| Gene symbol |
sucB |
| Other names/aliases |
- |
| Species |
Pseudomonas aeruginosa (strain ATCC 15692 ) |
Experiment description of studies that identified sucB in Pseudomonas aeruginosa |
| 1
|
| Experiment ID | 432 |
| Identified molecule | protein
|
| Extracellular vesicle type | Exosomes/Membrane vesicles |
| MISEV | EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
21751344
|
| Organism | Pseudomonas aeruginosa |
| Experiment description | Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa. |
| Authors | Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS. |
| Journal name |
Proteomics
|
| Publication year | 2011 |
| Sample | Pseudomonas aeruginosa |
| Sample name | Normal-Pseudomonas aeruginosa PAO1 |
| Isolation/purification methods | - |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Mass spectrometry |
| EV-TRACK |
EV110016: EV-METRIC:43%
|
|
|
| 2
|
| Experiment ID | 464 |
| Identified molecule | protein
|
| Extracellular vesicle type | Membrane vesicles |
| MISEV | EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
22909304
|
| Organism | Pseudomonas aeruginosa |
| Experiment description | Identification of proteins associated with the Pseudomonas aeruginosa biofilm extracellular matrix. |
| Authors | Toyofuku M, Roschitzki B, Riedel K, Eberl L. |
| Journal name |
J Proteome Res
|
| Publication year | 2012 |
| Sample | Pseudomonas aeruginosa |
| Sample name | Normal_biofilm-Pseudomonas aeruginosa PAO1 |
| Isolation/purification methods | - |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Mass spectrometry |
| EV-TRACK |
-
|
|
|
| 3
|
| Experiment ID | 465 |
| Identified molecule | protein
|
| Extracellular vesicle type | Membrane vesicles |
| MISEV | EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
22909304
|
| Organism | Pseudomonas aeruginosa |
| Experiment description | Identification of proteins associated with the Pseudomonas aeruginosa biofilm extracellular matrix. |
| Authors | Toyofuku M, Roschitzki B, Riedel K, Eberl L. |
| Journal name |
J Proteome Res
|
| Publication year | 2012 |
| Sample | Pseudomonas aeruginosa |
| Sample name | Normal_planktonic culture-Pseudomonas aeruginosa PAO1 |
| Isolation/purification methods | - |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Mass spectrometry |
| EV-TRACK |
-
|
|
|
| 4
|
| Experiment ID | 2151 |
| Identified molecule | Protein
|
| Extracellular vesicle type | Outer membrane vesicles |
| MISEV | Small EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
36781972
|
| Organism | Pseudomonas aeruginosa |
| Experiment description | The mechanism of Pseudomonas aeruginosa outer membrane vesicle biogenesis determines their protein composition |
| Authors | Zavan L, Fang H, Johnston EL, Whitchurch C, Greening DW, Hill AF, Kaparakis-Liaskos M. |
| Journal name |
Proteomics
|
| Publication year | 2023 |
| Sample | Pseudomonas aeruginosa |
| Sample name | P. aeruginosa strain PAO1 |
| Isolation/purification methods | Differential centrifugation Ultracentrifugation OptiPrep density gradient centrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Mass spectrometry |
| EV-TRACK |
-
|
|
|
| 5
|
| Experiment ID | 2152 |
| Identified molecule | Protein
|
| Extracellular vesicle type | Outer membrane vesicles |
| MISEV | Small EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
36781972
|
| Organism | Pseudomonas aeruginosa |
| Experiment description | The mechanism of Pseudomonas aeruginosa outer membrane vesicle biogenesis determines their protein composition |
| Authors | Zavan L, Fang H, Johnston EL, Whitchurch C, Greening DW, Hill AF, Kaparakis-Liaskos M. |
| Journal name |
Proteomics
|
| Publication year | 2023 |
| Sample | Pseudomonas aeruginosa |
| Sample name | P. aeruginosa strain PAO1 |
| Isolation/purification methods | Differential centrifugation Ultracentrifugation OptiPrep density gradient centrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Mass spectrometry |
| EV-TRACK |
-
|
|
|
| 6
|
| Experiment ID | 2153 |
| Identified molecule | Protein
|
| Extracellular vesicle type | Outer membrane vesicles |
| MISEV | Small EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
36781972
|
| Organism | Pseudomonas aeruginosa |
| Experiment description | The mechanism of Pseudomonas aeruginosa outer membrane vesicle biogenesis determines their protein composition |
| Authors | Zavan L, Fang H, Johnston EL, Whitchurch C, Greening DW, Hill AF, Kaparakis-Liaskos M. |
| Journal name |
Proteomics
|
| Publication year | 2023 |
| Sample | Pseudomonas aeruginosa |
| Sample name | P. aeruginosa strain PAO1 |
| Isolation/purification methods | Differential centrifugation Ultracentrifugation OptiPrep density gradient centrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Mass spectrometry |
| EV-TRACK |
-
|
|
|