Gene description for cpoB |
| Gene name |
cell division coordinator CpoB |
| Gene symbol |
cpoB |
| Other names/aliases |
ECK0731 ybgF |
| Species |
Escherichia coli str. K-12 substr. MG1655 |
Experiment description of studies that identified cpoB in Escherichia coli |
| 1
|
| Experiment ID | 373 |
| Identified molecule | protein
|
| Extracellular vesicle type | Membrane vesicles |
| MISEV | EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
17787032
|
| Organism | Escherichia coli |
| Experiment description | Global proteomic profiling of native outer membrane vesicles derived from Escherichia coli. |
| Authors | Lee EY, Bang JY, Park GW, Choi DS, Kang JS, Kim HJ, Park KS, Lee JO, Kim YK, Kwon KH, Kim KP, Gho YS. |
| Journal name |
Proteomics
|
| Publication year | 2007 |
| Sample | Escherichia coli |
| Sample name | Normal-Escherichia coli DH5α |
| Isolation/purification methods | - |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Mass spectrometry |
| EV-TRACK |
-
|
|
|
| 2
|
| Experiment ID | 2207 |
| Identified molecule | Protein
|
| Extracellular vesicle type | Outer membrane vesicles |
| MISEV | Small EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
36013250
|
| Organism | Escherichia coli |
| Experiment description | Proteomic Profiling of Outer Membrane Vesicles Released by Escherichia coli LPS Mutants Defective in Heptose Biosynthesis |
| Authors | Chiu YK, Yin T, Lee YT, Chen SJ, Wang YC, Ma KH. |
| Journal name |
J Pers Med
|
| Publication year | 2022 |
| Sample | Escherichia coli |
| Sample name | E. coli strain BW25113 |
| Isolation/purification methods | Differential centrifugation Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Mass spectrometry |
| EV-TRACK |
-
|
|
|
| 3
|
| Experiment ID | 2208 |
| Identified molecule | Protein
|
| Extracellular vesicle type | Outer membrane vesicles |
| MISEV | Small EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
36013250
|
| Organism | Escherichia coli |
| Experiment description | Proteomic Profiling of Outer Membrane Vesicles Released by Escherichia coli LPS Mutants Defective in Heptose Biosynthesis |
| Authors | Chiu YK, Yin T, Lee YT, Chen SJ, Wang YC, Ma KH. |
| Journal name |
J Pers Med
|
| Publication year | 2022 |
| Sample | Escherichia coli |
| Sample name | E. coli strain BW25113 |
| Isolation/purification methods | Differential centrifugation Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Mass spectrometry |
| EV-TRACK |
-
|
|
|
| 4
|
| Experiment ID | 2209 |
| Identified molecule | Protein
|
| Extracellular vesicle type | Outer membrane vesicles |
| MISEV | Small EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
36013250
|
| Organism | Escherichia coli |
| Experiment description | Proteomic Profiling of Outer Membrane Vesicles Released by Escherichia coli LPS Mutants Defective in Heptose Biosynthesis |
| Authors | Chiu YK, Yin T, Lee YT, Chen SJ, Wang YC, Ma KH. |
| Journal name |
J Pers Med
|
| Publication year | 2022 |
| Sample | Escherichia coli |
| Sample name | E. coli strain BW25113 |
| Isolation/purification methods | Differential centrifugation Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | Protein |
| Methods used in the study | Mass spectrometry |
| EV-TRACK |
-
|
|
|
| 5
|
| Experiment ID | 2210 |
| Identified molecule | Protein
|
| Extracellular vesicle type | Outer membrane vesicles |
| MISEV | Small EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
36013250
|
| Organism | Escherichia coli |
| Experiment description | Proteomic Profiling of Outer Membrane Vesicles Released by Escherichia coli LPS Mutants Defective in Heptose Biosynthesis |
| Authors | Chiu YK, Yin T, Lee YT, Chen SJ, Wang YC, Ma KH. |
| Journal name |
J Pers Med
|
| Publication year | 2022 |
| Sample | Escherichia coli |
| Sample name | E. coli strain BW25113 |
| Isolation/purification methods | Differential centrifugation Ultracentrifugation |
| Flotation density | - |
| Molecules identified in the study | |
| Methods used in the study | Mass spectrometry |
| EV-TRACK |
-
|
|
|
| 6
|
| Experiment ID | 2219 |
| Identified molecule | Protein
|
| Extracellular vesicle type | Outer membrane vesicles |
| MISEV | Small EVs |
| Identification method | Mass spectrometry
|
| PubMed ID |
32854612
|
| Organism | Escherichia coli |
| Experiment description | Probiotic Escherichia coli Nissle 1917-derived outer membrane vesicles enhance immunomodulation and antimicrobial activity in RAW264.7 macrophages |
| Authors | Hu R, Lin H, Li J, Zhao Y, Wang M, Sun X, Min Y, Gao Y, Yang M. |
| Journal name |
BMC Microbiol
|
| Publication year | 2020 |
| Sample | Escherichia coli |
| Sample name | E. coli strain Nissle 1917 |
| Isolation/purification methods | Centrifugation Filtration Centrifugal ultrafiltration Ultracentrifugation OptiPrep density gradient centrifugation |
| Flotation density | 1.127-1.175 g/mL, 1.271-1.295 g/mL |
| Molecules identified in the study | Protein |
| Methods used in the study | Mass spectrometry |
| EV-TRACK |
-
|
|
|